Basic Information
Locus ID:
nbisL1-mrna-15449
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 4106284 | 4110226 | + | nbisL1-mrna-15449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 49,254.01 Da | 42.29 | 90.72 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 217 | 258 | 2.67575E-6 | - |
| Pfam | PF00651 | BTB/POZ domain | 108 | 211 | 4.3E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 299 | 383 | 9.5E-13 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 96 | 211 | 2.51E-13 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 292 | 392 | 2.62E-22 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 216 | 289 | 1.3E-13 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 290 | 411 | 4.4E-23 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 95 | 215 | 9.9E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 115 | 215 | 3.1E-10 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 292 | 384 | 1.5E-33 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 115 | 183 | 10.943824 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 289 | 386 | 9.150879 | IPR000197 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67480.2 | BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. | 0 |
| RefSeq | XP_018809309.1 | BTB/POZ and TAZ domain-containing protein 4-like isoform X1 [Juglans regia] | 0 |
| Q9FJX5 | BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BT4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DQ86 | BTB/POZ and TAZ domain-containing protein 4-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108982395 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology