Basic Information
Locus ID:
nbisL1-mrna-1542
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 9445610 | 9450858 | + | nbisL1-mrna-1542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 59,007.46 Da | 37.42 | 113.65 | 0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 444 | 2.5E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 197 | 3.0E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 8.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 8.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 8.2E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 8.2E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_021651474.1 | sodium/hydrogen exchanger 2-like [Hevea brasiliensis] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2KLD8 | Sodium/hydrogen exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology