Basic Information
Locus ID:
nbisL1-mrna-15413
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
divergent subfamily of APPLE domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001811F_pilon | 831521 | 832455 | + | nbisL1-mrna-15413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 12,933.70 Da | 62.75 | 86.04 | -0.51 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03230.3 | - | 0 |
| RefSeq | XP_052290779.1 | - | 0 |
| Q9ZR08 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana OX=3702 GN=At4g03230 PE=3 SV=3 | 0 | |
| TrEMBL | A0A3S3QIN5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 4 | Ah016821, Ah016850, Ah017477, Ah017721 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg25976 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl44173, Sgl48947, Sgl51603, Sgl80022 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000025129, gene:ENSEOMG00000045775 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30198380 |
| Apiaceae | Apium graveolens | 2 | Ag3G00952, Ag4G01608 |
| Arecaceae | Cocos nucifera | 3 | COCNU_12G003960, COCNU_14G009620, scaffold045056G000040 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120109135, gene-LOC120110660 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G07110 |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq01G1193, Ceq01G2466, Ceq07G2277 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g00420 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g19070 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.602 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026929 |
| Poaceae | Echinochloa crus-galli | 1 | CH06.1976 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0202258, Pt_Chr0206446 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G218400 |
| Poaceae | Zea mays | 1 | Zm00001eb036600_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-11727, nbis-gene-28893, nbis-gene-55902 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.53456.1 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14255 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-15413 |
| Salicaceae | Populus euphratica | 1 | populus_peu19682 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2269 |
| Zosteraceae | Zostera marina | 2 | Zosma04g21350.v3.1, Zosma22g00070.v3.1 |