Basic Information
Locus ID:
nbisL1-mrna-15380
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001811F_pilon | 600811 | 608712 | + | nbisL1-mrna-15380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 83,151.71 Da | 44.28 | 90.42 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 471 | 742 | 4.3E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 77 | 2.4E-4 | IPR013210 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 412 | 419 | 6.8E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 202 | 8.93E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 447 | 742 | 1.91E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 754 | 4.8E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 207 | 5.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 435 | 545 | 1.3E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 756 | 34.619125 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 290 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_043805600.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Manihot esculenta] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K7E2 | Protein STRUBBELIG-RECEPTOR FAMILY 3-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology