Basic Information
Locus ID:
nbisL1-mrna-15330
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000134F_pilon | 2061100 | 2064331 | + | nbisL1-mrna-15330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 65,108.04 Da | 47.47 | 82.33 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 282 | 509 | 1.6E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 263 | 496 | 2.16E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 355 | 536 | 1.3E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 255 | 354 | 2.5E-26 | - |
| SMART | SM00220 | serkin_6 | 280 | 574 | 7.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 579 | 34.619125 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 308 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 400 | 412 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 154 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024450126.2 | protein kinase STUNTED [Populus trichocarpa] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2BC20 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G019300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0856 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G0937 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-8921 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.182 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.1319 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-31886, nbisL1-mrna-31892 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1488 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15330 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.446 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003168 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3304 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11165 |
| Salicaceae | Populus euphratica | 3 | populus_peu15376, populus_peu15377, populus_peu33029 |