Basic Information
Locus ID:
nbisL1-mrna-15321
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
leucine-rich repeat receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001811F_pilon | 238289 | 241099 | + | nbisL1-mrna-15321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 42,956.17 Da | 34.97 | 87.22 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 249 | 2.0E-25 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 2 | 96 | 1.2E-14 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 321 | 1.22E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 323 | 4.3E-59 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1 | 120 | 3.4E-14 | - |
| SMART | SM00220 | serkin_6 | 78 | 276 | 2.0E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 323 | 22.591091 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14840.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_025014097.2 | - | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MSW6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19151, jg24283 |
| Brassicaceae | Brassica nigra | 1 | BniB08g059010.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0910, Ceq04G0500 |
| Poaceae | Echinochloa crus-galli | 1 | CH08.1473 |
| Poaceae | Oryza coarctata | 1 | Oco18G002890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.130 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11097, nbisL1-mrna-24160 |
| Rhizophoraceae | Rhizophora mangle | 8 | nbisL1-mrna-15312, nbisL1-mrna-15313, nbisL1-mrna-15314 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu26044 |