Basic Information
Locus ID:
nbisL1-mrna-15250
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 3583782 | 3586710 | + | nbisL1-mrna-15250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 100,830.41 Da | 39.49 | 79.67 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 553 | 818 | 3.1611E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 549 | 817 | 1.8E-48 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 36 | 430 | 3.5E-33 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 532 | 816 | 5.53E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 624 | 846 | 9.1E-61 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 32 | 202 | 5.6E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 518 | 623 | 2.1E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 248 | 432 | 6.6E-25 | - |
| SMART | SM00220 | serkin_6 | 547 | 820 | 5.1E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 547 | 820 | 37.375256 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 553 | 576 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 668 | 680 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021639199.1 | - | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WBL3 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G057000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 7 | nbisL1-mrna-15250, nbisL1-mrna-15253, nbisL1-mrna-15254 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12685 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.97 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18379, nbisL1-mrna-21419 |