Basic Information
Locus ID:
nbisL1-mrna-15241
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 3523118 | 3526432 | - | nbisL1-mrna-15241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 56,091.42 Da | 44.23 | 72.97 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 212 | 279 | 1.47473E-17 | - |
| Pfam | PF00240 | Ubiquitin family | 219 | 281 | 1.4E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 220 | 293 | 5.63E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 212 | 307 | 8.7E-21 | - |
| SMART | SM00213 | ubq_7 | 212 | 281 | 3.7E-15 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 212 | 285 | 19.216 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 220 | 240 | 8.8E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 241 | 261 | 8.8E-9 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 262 | 283 | 8.8E-9 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 492 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_018455635.1 | - | 0 |
| TrEMBL | Q462E1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbisL1-mrna-15241.