Basic Information
Locus ID:
nbisL1-mrna-1516
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000150F_pilon | 6472662 | 6475735 | + | nbisL1-mrna-1516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 64,917.63 Da | 28.41 | 85.29 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 472 | 534 | 1.72674E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 73 | 346 | 2.01416E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 76 | 347 | 2.4E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 471 | 534 | 1.2E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 400 | 460 | 5.5E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 384 | 9.31E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 386 | 560 | 5.01E-43 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 159 | 1.1E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 356 | 537 | 4.9E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 355 | 6.3E-57 | - |
| SMART | SM00054 | efh_1 | 436 | 464 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 9.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 6.2E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 74 | 347 | 8.0E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 508 | 536 | 4.6E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.987627 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 9.603815 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 504 | 539 | 13.286007 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 347 | 47.862682 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 517 | 529 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 194 | 206 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067K856 | Calcium-dependent protein kinase 30 OS=Jatropha curcas OX=180498 GN=JCGZ_11569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology