Basic Information
Locus ID:
nbisL1-mrna-14985
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 1178415 | 1184495 | + | nbisL1-mrna-14985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 55,166.52 Da | 43.22 | 87.01 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 259 | 338 | 9.3E-20 | IPR001245 |
| Pfam | PF02826 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | 446 | 499 | 1.9E-9 | IPR006140 |
| SUPERFAMILY | SSF52283 | Formate/glycerate dehydrogenase catalytic domain-like | 405 | 445 | 8.5E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 241 | 338 | 1.28E-22 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 158 | 6.68E-7 | IPR011009 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 445 | 498 | 2.71E-7 | IPR036291 |
| Gene3D | G3DSA:3.40.50.720 | - | 434 | 443 | 2.3E-9 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 408 | 433 | 2.3E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 174 | 3.7E-11 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 447 | 488 | 1.8E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 180 | 346 | 3.6E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 341 | 10.237976 | IPR000719 |
| Coils | Coil | Coil | 19 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_012081776.1 | serine/threonine-protein kinase STY13 [Jatropha curcas] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JN97 | Uncharacterized protein MANES_15G183000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology