Basic Information
Locus ID:
nbisL1-mrna-14957
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 1005146 | 1008637 | + | nbisL1-mrna-14957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 72,585.19 Da | 35.73 | 90.88 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 332 | 595 | 5.36655E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 61 | 133 | 3.6E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 592 | 1.8E-43 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 243 | 1.4E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 625 | 9.98E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 601 | 8.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 401 | 1.1E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 144 | 246 | 1.2E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 38 | 135 | 4.3E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 326 | 575 | 1.8E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 135 | 15.058619 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 148 | 246 | 14.497388 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 326 | 610 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 447 | 459 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_012081199.1 | cysteine-rich receptor-like protein kinase 42 [Jatropha curcas] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology