Basic Information
Locus ID:
nbisL1-mrna-14956
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 996143 | 999532 | + | nbisL1-mrna-14956 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 52,216.53 Da | 43.05 | 80.82 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 71 | 131 | 8.1E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 155 | 241 | 2.4E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 373 | 3.7E-9 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 460 | 8.72E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 244 | 5.2E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 42 | 133 | 1.6E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 375 | 4.6E-12 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 37 | 133 | 14.225825 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 244 | 14.180565 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 471 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.3 | - | 0 |
| RefSeq | XP_012081199.1 | cysteine-rich receptor-like protein kinase 42 [Jatropha curcas] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2K1V8 | Cysteine-rich receptor-like protein kinase 42 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology