Basic Information
Locus ID:
nbisL1-mrna-14955
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 985763 | 989831 | + | nbisL1-mrna-14955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 45,949.54 Da | 46.64 | 83.37 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 143 | 203 | 1.1E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 237 | 318 | 1.9E-6 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 124 | 5.7E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 254 | 319 | 7.36E-10 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 129 | 207 | 2.0E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 240 | 312 | 1.2E-12 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 126 | 2.6E-14 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 126 | 14.768951 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28670.1 | Protein kinase family protein with domain of unknown function (DUF26). | 0 |
| RefSeq | XP_024460704.1 | cysteine-rich receptor-like protein kinase 46 [Populus trichocarpa] | 0 |
| Q9M0G5 | Cysteine-rich receptor-like protein kinase 46 OS=Arabidopsis thaliana OX=3702 GN=CRK46 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7ZFV5 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_028246 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology