Basic Information
Locus ID:
nbisL1-mrna-14952
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001461F_pilon | 2324958 | 2336338 | - | nbisL1-mrna-14952 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 57,914.99 Da | 61.60 | 59.89 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 251 | 307 | 3.7E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 425 | 481 | 2.1E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 248 | 309 | 4.84E-24 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 415 | 483 | 3.27E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 408 | 484 | 1.8E-33 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 235 | 310 | 9.2E-26 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 250 | 308 | 1.5E-31 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 423 | 482 | 6.6E-35 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 245 | 309 | 22.320162 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 418 | 483 | 36.471798 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 40 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021651262.1 | probable WRKY transcription factor 3 isoform X1 [Hevea brasiliensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology