Basic Information
Locus ID:
nbisL1-mrna-1494
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 9963021 | 9967178 | + | nbisL1-mrna-1494 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 68,415.99 Da | 53.62 | 75.30 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 6.92766E-135 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 3.4E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 323 | 1.24E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 334 | 8.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 3.0E-22 | - |
| SMART | SM00220 | serkin_6 | 4 | 262 | 9.8E-85 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 262 | 46.675426 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021607621.1 | serine/threonine-protein kinase Nek2 isoform X2 [Manihot esculenta] | 0 |
| A2ZMH2 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2C9WN04 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G204800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology