Basic Information
Locus ID:
nbisL1-mrna-14932
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 822619 | 824912 | - | nbisL1-mrna-14932 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 37,855.58 Da | 45.41 | 62.35 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 49 | 190 | 1.1E-19 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 33 | 209 | 2.22E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 57 | 214 | 5.3E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 48 | 209 | 29.1569 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_015576184.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Ricinus communis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | B9S663 | NAC domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1064740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology