Basic Information
Locus ID:
nbisL1-mrna-14875
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001461F_pilon | 1326487 | 1327980 | - | nbisL1-mrna-14875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 55,408.16 Da | 42.04 | 86.36 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 9 | 468 | 1.56352E-68 | IPR002213 |
| Pfam | PF00201 | UDP-glucoronosyl and UDP-glucosyl transferase | 271 | 419 | 3.4E-19 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 7 | 482 | 2.15E-103 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 1 | 275 | 1.9E-59 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 276 | 464 | 4.1E-62 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12890.1 | UDP-Glycosyltransferase superfamily protein. | 0 |
| RefSeq | XP_011037879.1 | PREDICTED: UDP-glycosyltransferase 92A1-like [Populus euphratica] | 0 |
| Q9LXV0 | UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana OX=3702 GN=UGT92A1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6M2EUS3 | Glycosyltransferase OS=Populus davidiana OX=266767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology