Basic Information
Locus ID:
nbisL1-mrna-14874
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001461F_pilon | 1299855 | 1301348 | - | nbisL1-mrna-14874 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 55,602.35 Da | 36.29 | 83.60 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 9 | 460 | 8.3944E-66 | IPR002213 |
| Pfam | PF00201 | UDP-glucoronosyl and UDP-glucosyl transferase | 271 | 419 | 3.3E-18 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 7 | 479 | 5.38E-101 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 276 | 464 | 1.8E-61 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 1 | 275 | 1.9E-58 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12890.1 | UDP-Glycosyltransferase superfamily protein. | 0 |
| RefSeq | XP_002513452.1 | UDP-glycosyltransferase 92A1 [Ricinus communis] | 0 |
| Q9LXV0 | UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana OX=3702 GN=UGT92A1 PE=2 SV=1 | 0 | |
| TrEMBL | B9RI83 | Glycosyltransferase OS=Ricinus communis OX=3988 GN=RCOM_1576980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology