Basic Information
Locus ID:
nbisL1-mrna-14767
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
proline-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000160F_pilon | 1342144 | 1344347 | - | nbisL1-mrna-14767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 30,878.61 Da | 77.08 | 53.74 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| PRINTS | PR01217 | Proline rich extensin signature | 60 | 76 | 8.4E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 33 | 54 | 8.4E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 89 | 114 | 8.4E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 17 | 29 | 8.4E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70460.1 | root hair specific 10. | 0 |
| RefSeq | XP_030449296.1 | proline-rich receptor-like protein kinase PERK13 [Syzygium oleosum] | 0 |
| Q9CAL8 | Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana OX=3702 GN=PERK13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5AHA6 | Mitogen-activated protein kinase kinase kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_332520 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag6G02585 |
| Poaceae | Thinopyrum elongatum | 3 | Tel3E01G023600, Tel3E01G784400, Tel6E01G481700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7BG015980 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.43065.1 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14767 |