halophFGD

Basic Information

Locus ID: nbisL1-mrna-14717

Species & Taxonomic ID: Carallia pectinifolia & 98586

Genome Assembly: GCA_037832335.1

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr06	21839389	21840175	+	nbisL1-mrna-14717

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.20	19,596.20 Da	45.42	84.77	-0.15

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	1	111	4.0E-8	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	131	1.96E-14	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	121	1.0E-17	-
MobiDBLite	mobidb-lite	consensus disorder prediction	152	176	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G40380.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase.
RefSeq	XP_034909167.1	cysteine-rich receptor-like protein kinase 1 [Populus alba]
Swiss-Prot	Q9LMB9	Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=2 SV=2
TrEMBL	A0A2K1XJS2	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_11_RagTag.1037
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-14716, nbisL1-mrna-14717
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-5018
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-12600
Salicaceae	Populus euphratica	2	populus_peu30147, populus_peu30148
Solanaceae	Solanum chilense	1	SOLCI004021600