Basic Information
Locus ID:
nbisL1-mrna-1471
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
CBL02
Description:
calcineurin b-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12089670 | 12092496 | - | nbisL1-mrna-1471 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 26,001.23 Da | 46.61 | 94.03 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13833 | EF-hand domain pair | 64 | 109 | 5.6E-4 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 122 | 187 | 1.4E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 33 | 218 | 1.68E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 32 | 226 | 6.7E-70 | - |
| SMART | SM00054 | efh_1 | 86 | 114 | 1.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 123 | 151 | 82.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 167 | 195 | 0.93 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 82 | 117 | 11.584389 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 163 | 198 | 11.38912 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 119 | 154 | 8.822743 | IPR002048 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26570.1 | calcineurin B-like 3. member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) | 0 |
| RefSeq | XP_021288144.1 | calcineurin B-like protein 3 [Herrania umbratica] | 0 |
| Q8LAS7 | Calcineurin B-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CBL2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6J1ANM8 | Calcineurin B-like protein OS=Herrania umbratica OX=108875 GN=LOC110419424 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology