Basic Information
Locus ID:
nbisL1-mrna-147
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 2134576 | 2143392 | - | nbisL1-mrna-147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 105,365.18 Da | 37.65 | 95.03 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 631 | 897 | 7.03727E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 76 | 4.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 302 | 347 | 2.6E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 628 | 894 | 1.1E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 914 | 5.19E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 411 | 1.14E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 296 | 4.8E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 424 | 3.1E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 909 | 4.5E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 595 | 700 | 9.3E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 324 | 348 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 277 | 301 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 228 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 229 | 253 | 40.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 625 | 899 | 3.3E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 133 | 157 | 320.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 899 | 37.262184 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 918 | 954 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 954 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021678206.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Hevea brasiliensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2M563 | Putative LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology