Basic Information
Locus ID:
nbisL1-mrna-14698
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11294106 | 11297362 | - | nbisL1-mrna-14698 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 21,173.40 Da | 46.19 | 88.50 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 75 | 162 | 1.59151E-45 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 75 | 184 | 2.0E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 70 | 166 | 3.21E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 62 | 169 | 3.5E-42 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 76 | 142 | 9.547723 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_011044089.1 | PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Populus euphratica] | 0 |
| Q9SW27 | Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KN29 | Membrane-anchored ubiquitin-fold protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology