Basic Information
Locus ID:
nbisL1-mrna-14688
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 21554104 | 21556830 | - | nbisL1-mrna-14688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 43,005.80 Da | 36.52 | 80.62 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 90 | 358 | 5.85202E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 358 | 4.1E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 358 | 1.64E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 368 | 7.0E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 168 | 1.3E-19 | - |
| SMART | SM00220 | serkin_6 | 84 | 361 | 4.4E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 361 | 41.474117 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 181 | 194 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 285 | 307 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 329 | 351 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 219 | 237 | 5.0E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 65 | - | - |
| Coils | Coil | Coil | 9 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021592270.1 | serine/threonine-protein kinase STY13 [Manihot esculenta] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JRS3 | Uncharacterized protein MANES_14G067100 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology