Basic Information
Locus ID:
nbisL1-mrna-14582
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002206F_pilon | 1056371 | 1060711 | + | nbisL1-mrna-14582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 70,025.88 Da | 40.20 | 96.30 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 2.2E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 177 | 1.5E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 564 | 2.8E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 565 | 3.69E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 191 | 3.79E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 208 | 1.1E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 583 | 1.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 371 | 2.7E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 2.5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 295 | 564 | 4.6E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 171 | 34.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 574 | 34.732197 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 301 | 323 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 414 | 426 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 619 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012071584.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Jatropha curcas] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836IXA8 | Leucine-rich repeat family protein OS=Salix suchowensis OX=1278906 GN=IMY05_006G0143400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology