Basic Information
Locus ID:
nbisL1-mrna-14560
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10257738 | 10260813 | - | nbisL1-mrna-14560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 53,046.01 Da | 24.86 | 85.50 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 368 | 430 | 3.38698E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 367 | 430 | 8.8E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 184 | 8.4E-23 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 295 | 356 | 8.4E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 277 | 456 | 1.82E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 257 | 8.5E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 257 | 433 | 1.2E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 187 | 3.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 250 | 8.8E-12 | - |
| SMART | SM00054 | efh_1 | 332 | 360 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 404 | 432 | 4.6E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 368 | 396 | 6.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 296 | 324 | 9.3E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 13.286007 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 364 | 399 | 14.987627 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 436 | 14.803258 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 328 | 363 | 9.603815 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 292 | 327 | 14.764463 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 341 | 353 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 377 | 389 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 305 | 317 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 413 | 425 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 41 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067K856 | Calcium-dependent protein kinase 30 OS=Jatropha curcas OX=180498 GN=JCGZ_11569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology