Basic Information
Locus ID:
nbisL1-mrna-14466
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 9459474 | 9463272 | - | nbisL1-mrna-14466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 64,358.30 Da | 38.20 | 98.86 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 108 | 167 | 5.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 359 | 522 | 4.5E-26 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 55 | 4.6E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 523 | 7.44E-42 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 206 | 2.72E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 548 | 1.2E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 430 | 1.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 218 | 4.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 130 | 1.5E-25 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 156 | 178 | 7.172906 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 594 | 24.032759 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021647181.1 | probable inactive receptor kinase RLK902 [Hevea brasiliensis] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9T5 | Uncharacterized protein MANES_06G003700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology