Basic Information
Locus ID:
nbisL1-mrna-1446
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 14979250 | 14982635 | - | nbisL1-mrna-1446 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 59,332.15 Da | 46.61 | 82.33 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 206 | 468 | 8.4E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 468 | 1.5E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 496 | 1.4E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 178 | 277 | 1.0E-23 | - |
| SMART | SM00220 | serkin_6 | 203 | 467 | 5.6E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 203 | 475 | 33.135056 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 209 | 231 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 322 | 334 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048235006.1 | - | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836DS61 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology