Basic Information
Locus ID:
nbisL1-mrna-14429
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 19542306 | 19545385 | - | nbisL1-mrna-14429 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 72,452.60 Da | 38.11 | 97.48 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 381 | 644 | 9.17407E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 1.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 1.1E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 378 | 638 | 9.7E-40 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 217 | 8.75E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 650 | 4.57E-61 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 187 | 6.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 449 | 5.4E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 233 | 1.3E-5 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 662 | 3.3E-49 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.758159 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 375 | 649 | 34.039631 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 381 | 403 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 668 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021592418.1 | - | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9T5 | Uncharacterized protein MANES_06G003700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology