Basic Information
Locus ID:
nbisL1-mrna-14398
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001486F_pilon | 2386422 | 2398478 | - | nbisL1-mrna-14398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 108,485.52 Da | 33.45 | 93.99 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 640 | 902 | 1.44226E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 635 | 857 | 3.2E-46 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 368 | 553 | 6.7E-47 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 903 | 2.6E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 358 | 5.65E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 95 | 358 | 2.5E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 709 | 2.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 914 | 1.0E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 367 | 557 | 1.2E-35 | - |
| SMART | SM00220 | serkin_6 | 634 | 904 | 7.9E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 904 | 37.728607 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 754 | 766 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_037493496.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Jatropha curcas] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A140G4X5 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology