Basic Information
Locus ID:
nbisL1-mrna-14382
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 18906587 | 18907299 | - | nbisL1-mrna-14382 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 18,092.83 Da | 41.27 | 111.50 | 0.22 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73650.1 | Protein of unknown function (DUF1295). | 0 |
| RefSeq | XP_021659801.1 | - | 0 |
| TrEMBL | A0A2P2JPA2 | S5A_REDUCTASE domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg27009, jg6820 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22230 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018065 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g182850 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg26021, Sbi_jg9870 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18847 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017063 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl45961, Sgl50659 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010480, gene:ENSEOMG00000032034 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0005510, CQ.Regalona.r1.8BG0005690 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30150070, pistato.v30292140 |
| Apiaceae | Apium graveolens | 1 | Ag4G00628 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G008130, COCNU_03G008480 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701854, gene-LOC103721395 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G30774 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G18180.1, AT1G73650.3 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10008683m.g.v1.0, Thhalv10018948m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g16160.v2.2, Sp5g28820.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g051990.2N, BniB04g032630.2N, BniB05g070770.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2841 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2994 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g09000 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0254s00011.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g16810 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.102 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00033258 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16547 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.876, BH01.1018, CH01.1066 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0219410, gene-QOZ80_3BG0264680 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0336810.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_062855 |
| Poaceae | Oryza coarctata | 2 | Oco05G021410, Oco06G022210 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g50070.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G109200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0104777, Pt_Chr0104778, Pt_Chr0502649 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G007270, Chr07G025790, Chr12G030190 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G079200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG042130, gene_TRIDC4BG006830 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G270500.1, TraesCS4B02G043600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb216550_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14796, nbis-gene-15896 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2971, Zma_g664 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.40, evm.TU.LG04.707 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g21510 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.704 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14382, nbisL1-mrna-28655 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4770 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1661 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.454 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00000523, Maker00008907 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14448 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1664 |
| Salicaceae | Populus euphratica | 2 | populus_peu28271, populus_peu28324 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132599845, gene-LOC132633215 |
| Solanaceae | Solanum chilense | 2 | SOLCI000422600, SOLCI006090500 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107015431, gene-LOC107023128 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_12646 |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G1013, TC05G1019 |
| Zosteraceae | Zostera marina | 1 | Zosma03g16930.v3.1 |