Basic Information
Locus ID:
nbisL1-mrna-14306
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001486F_pilon | 967644 | 971588 | + | nbisL1-mrna-14306 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 102,758.41 Da | 38.87 | 89.06 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 594 | 867 | 5.25473E-96 | - |
| Pfam | PF13855 | Leucine rich repeat | 395 | 435 | 1.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 246 | 303 | 2.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 68 | 8.6E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 373 | 0.0057 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 591 | 863 | 7.0E-48 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 446 | 2.38E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 564 | 873 | 3.63E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 551 | 665 | 3.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 875 | 2.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 332 | 5.7E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 460 | 2.5E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 398 | 421 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 312 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 422 | 444 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 215 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 140 | 0.015 | IPR003591 |
| SMART | SM00220 | serkin_6 | 588 | 868 | 4.8E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 588 | 868 | 39.905243 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 713 | 725 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 594 | 616 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 422 | 435 | 6.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 401 | 414 | 6.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 903 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 903 | 944 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology