Basic Information
Locus ID:
nbisL1-mrna-14246
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000002F_pilon | 2321252 | 2323675 | + | nbisL1-mrna-14246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 85,837.11 Da | 39.38 | 83.75 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 504 | 785 | 3.81833E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 499 | 781 | 1.1E-47 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 167 | 193 | 1.7E-5 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 66 | 338 | 7.59E-22 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 481 | 783 | 3.33E-75 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 65 | 319 | 1.1E-27 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 579 | 793 | 1.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 458 | 578 | 3.8E-34 | - |
| SMART | SM00220 | serkin_6 | 498 | 787 | 2.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 787 | 37.756874 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 504 | 526 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 629 | 641 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 481 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_034923762.1 | putative serine/threonine-protein kinase-like protein CCR3 [Populus alba] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7Z7B9 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_031210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology