Basic Information
Locus ID:
nbisL1-mrna-1419
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 14760715 | 14765084 | - | nbisL1-mrna-1419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 51,868.29 Da | 44.03 | 83.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 20 | 102 | 2.0E-12 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 104 | 1.52E-16 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 147 | 388 | 5.8E-9 | IPR036322 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 108 | 1.3E-19 | IPR011333 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_021622738.1 | protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 [Manihot esculenta] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2J4R6 | Uncharacterized protein MANES_09G103400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology