Basic Information
Locus ID:
nbisL1-mrna-14174
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 16881217 | 16885936 | + | nbisL1-mrna-14174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 115,759.43 Da | 32.50 | 106.84 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 782 | 1050 | 9.6684E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 124 | 182 | 6.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 581 | 640 | 5.4E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 778 | 978 | 5.5E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 197 | 218 | 0.84 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 5.3E-13 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 466 | 8.16E-16 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 753 | 1047 | 1.48E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 86 | 671 | 9.52E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 442 | 708 | 1.7E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 736 | 851 | 2.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 852 | 1051 | 1.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 285 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 412 | 8.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 187 | 1.8E-46 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 651 | 677 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 603 | 627 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 776 | 1051 | 2.0E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 333 | 356 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1052 | 39.43882 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 896 | 908 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 804 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 172 | 185 | 2.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 603 | 616 | 2.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021660513.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Hevea brasiliensis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | B9RGW3 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1444980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology