Basic Information
Locus ID:
nbisL1-mrna-1413
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10599135 | 10602318 | - | nbisL1-mrna-1413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 105,055.15 Da | 31.34 | 103.45 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 715 | 812 | 8.5E-14 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 6.6E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 537 | 595 | 1.9E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 176 | 198 | 0.0081 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 936 | 1.88E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 333 | 432 | 1.81E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 108 | 553 | 6.91E-66 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 371 | 631 | 1.4E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 257 | 2.0E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 367 | 7.4E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 711 | 795 | 5.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 186 | 2.1E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 959 | 8.2E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 126 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 463 | 44.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 968 | 12.428746 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 717 | 741 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 968 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034916139.1 | MDIS1-interacting receptor like kinase 1 [Populus alba] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5QP46 | Leucine-rich repeat transmembrane protein kinase OS=Populus alba OX=43335 GN=D5086_0000067470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology