Basic Information
Locus ID:
nbisL1-mrna-14096
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 15990064 | 15993031 | + | nbisL1-mrna-14096 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 86,578.85 Da | 36.58 | 82.50 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 507 | 790 | 1.34852E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 502 | 786 | 1.9E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 788 | 8.36E-75 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 144 | 340 | 3.4E-22 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 195 | 330 | 4.4E-14 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 30 | 194 | 3.6E-9 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 461 | 583 | 1.9E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 799 | 2.2E-51 | - |
| SMART | SM00220 | serkin_6 | 501 | 792 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 792 | 37.728607 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 507 | 529 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_002315158.2 | - | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | B9HSN6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G188600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology