Basic Information
Locus ID:
nbisL1-mrna-14064
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001346F_pilon | 2303378 | 2322262 | - | nbisL1-mrna-14064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 368,917.84 Da | 50.00 | 91.99 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 226 | 574 | 1.31249E-171 | - |
| Pfam | PF01118 | Semialdehyde dehydrogenase, NAD binding domain | 2947 | 3054 | 6.9E-16 | IPR000534 |
| Pfam | PF00225 | Kinesin motor domain | 233 | 564 | 8.5E-110 | IPR001752 |
| Pfam | PF02774 | Semialdehyde dehydrogenase, dimerisation domain | 3054 | 3237 | 1.2E-17 | IPR012280 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 227 | 598 | 6.13E-119 | IPR027417 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 2944 | 3077 | 1.02E-21 | IPR036291 |
| SUPERFAMILY | SSF55347 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 3104 | 3234 | 7.3E-36 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 2934 | 3061 | 1.2E-27 | - |
| Gene3D | G3DSA:3.30.360.10 | Dihydrodipicolinate Reductase; domain 2 | 3098 | 3234 | 1.9E-45 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 223 | 576 | 9.8E-137 | IPR036961 |
| SMART | SM00859 | Semialdhyde_dh_3 | 2947 | 3062 | 1.6E-10 | IPR000534 |
| SMART | SM00129 | kinesin_4 | 225 | 572 | 4.4E-164 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 227 | 564 | 124.075783 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 460 | 471 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 461 | 479 | 4.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 299 | 320 | 4.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 428 | 445 | 4.5E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 514 | 535 | 4.5E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 176 | - | - |
| Coils | Coil | Coil | 2132 | 2152 | - | - |
| Coils | Coil | Coil | 1187 | 1207 | - | - |
| Coils | Coil | Coil | 2741 | 2810 | - | - |
| Coils | Coil | Coil | 1478 | 1512 | - | - |
| Coils | Coil | Coil | 2585 | 2605 | - | - |
| Coils | Coil | Coil | 1028 | 1048 | - | - |
| Coils | Coil | Coil | 1640 | 1660 | - | - |
| Coils | Coil | Coil | 1226 | 1246 | - | - |
| Coils | Coil | Coil | 948 | 1003 | - | - |
| Coils | Coil | Coil | 1352 | 1372 | - | - |
| Coils | Coil | Coil | 578 | 598 | - | - |
| Coils | Coil | Coil | 2413 | 2454 | - | - |
| Coils | Coil | Coil | 2045 | 2065 | - | - |
| Coils | Coil | Coil | 2083 | 2103 | - | - |
| Coils | Coil | Coil | 2652 | 2672 | - | - |
| Coils | Coil | Coil | 2836 | 2856 | - | - |
| Coils | Coil | Coil | 825 | 852 | - | - |
| Coils | Coil | Coil | 2886 | 2906 | - | - |
| Coils | Coil | Coil | 2476 | 2538 | - | - |
| Coils | Coil | Coil | 2543 | 2566 | - | - |
| Coils | Coil | Coil | 1937 | 1964 | - | - |
| Coils | Coil | Coil | 659 | 693 | - | - |
| Coils | Coil | Coil | 920 | 940 | - | - |
| Coils | Coil | Coil | 1067 | 1136 | - | - |
| Coils | Coil | Coil | 2167 | 2194 | - | - |
| Coils | Coil | Coil | 1605 | 1625 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021639818.1 | kinesin-like protein KIN-12D [Hevea brasiliensis] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A835KFJ6 | Kinesin motor domain-containing protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf04G0100300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology