Basic Information
Locus ID:
nbisL1-mrna-14060
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000061F_pilon | 3391768 | 3395429 | - | nbisL1-mrna-14060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 36,317.75 Da | 39.24 | 102.57 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 166 | 307 | 1.1E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 131 | 310 | 4.16E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 324 | 2.8E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 325 | 12.555952 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_002531377.1 | pollen receptor-like kinase 2 [Ricinus communis] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SZF8 | Leucine-rich repeat transmembrane protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_0645130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg21546, jg24560 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_12230 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah008832, Ah008833 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg18264, Sbi_jg36620 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg4605 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23416, Sgl28541 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000029932, gene:ENSEOMG00000043679 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0023040, CQ.Regalona.r1.4AG0023050 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30153350, pistato.v30155980 |
| Apiaceae | Apium graveolens | 1 | Ag4G02402 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G009400 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103713948 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2795.V1.1 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g07930 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g01750 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.1920, evm.TU.LG05.1921 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G03414 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0614920.1.CDS1 ... |
| Poaceae | Oryza coarctata | 2 | Oco01G011920, Oco02G012160 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g34790.1 |
| Poaceae | Thinopyrum elongatum | 3 | Tel6E01G547700, Tel7E01G719600, Tel7E01G719800 |
| Poaceae | Triticum aestivum | 15 | TraesCS6A02G305700.1.cds1, TraesCS6B02G334100.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-41929 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc04g01390, gene.Posoc04g23290 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.1583 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-19580, nbisL1-mrna-8693 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10182 |
| Rhizophoraceae | Ceriops zippeliana | 11 | nbisL1-mrna-14060, nbisL1-mrna-15105, nbisL1-mrna-21065 ... |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000018l.32, add.evm.TU.utg000028l.44 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003840 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20487 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22692 |
| Salicaceae | Populus euphratica | 2 | populus_peu17871, populus_peu17872 |
| Solanaceae | Solanum chilense | 2 | SOLCI001046000, SOLCI002513100 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_12127, gene_12128 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G0386 |
| Zosteraceae | Zostera marina | 2 | Zosma03g00920.v3.1, Zosma06g17790.v3.1 |