Basic Information
Locus ID:
nbisL1-mrna-1406
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10652286 | 10664064 | + | nbisL1-mrna-1406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 137,052.52 Da | 42.62 | 86.05 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 394 | 663 | 9.56205E-94 | - |
| CDD | cd01945 | ribokinase_group_B | 899 | 1241 | 9.25691E-100 | - |
| Pfam | PF00294 | pfkB family carbohydrate kinase | 1185 | 1241 | 8.3E-12 | IPR011611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 391 | 659 | 2.5E-47 | IPR001245 |
| Pfam | PF00294 | pfkB family carbohydrate kinase | 906 | 1135 | 8.5E-22 | IPR011611 |
| SUPERFAMILY | SSF53613 | Ribokinase-like | 900 | 1245 | 1.97E-55 | IPR029056 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 661 | 2.05E-79 | IPR011009 |
| Gene3D | G3DSA:3.40.1190.20 | - | 899 | 1237 | 3.9E-64 | IPR029056 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 685 | 4.4E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 360 | 463 | 8.8E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 663 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 510 | 522 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 394 | 416 | - | IPR017441 |
| ProSitePatterns | PS00584 | pfkB family of carbohydrate kinases signature 2. | 1193 | 1206 | - | IPR002173 |
| PRINTS | PR00990 | Ribokinase signature | 1111 | 1122 | 4.9E-6 | IPR002139 |
| PRINTS | PR00990 | Ribokinase signature | 902 | 923 | 4.9E-6 | IPR002139 |
| PRINTS | PR00990 | Ribokinase signature | 929 | 948 | 4.9E-6 | IPR002139 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20300.1 | Protein kinase superfamily protein. Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs. | 0 |
| RefSeq | XP_002533625.3 | receptor-like serine/threonine-protein kinase ALE2 [Ricinus communis] | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J6GJA9 | Protein kinase domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_009035 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology