Basic Information
Locus ID:
nbisL1-mrna-14056
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001346F_pilon | 2254591 | 2259199 | - | nbisL1-mrna-14056 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 66,704.62 Da | 50.26 | 85.69 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 149 | 444 | 1.31867E-121 | - |
| Pfam | PF00069 | Protein kinase domain | 149 | 445 | 1.2E-66 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 499 | 584 | 2.81E-7 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 144 | 473 | 4.72E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 238 | 454 | 5.9E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 493 | 511 | 3.2E-6 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 512 | 581 | 3.2E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 150 | 237 | 1.8E-21 | - |
| SMART | SM00220 | serkin_6 | 148 | 445 | 7.5E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 445 | 49.742504 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 180 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 272 | 284 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.2 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_037497664.1 | - | 0 |
| P53681 | CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1 | 0 | |
| TrEMBL | B9S785 | Calcium-dependent protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_0774500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology