Basic Information
Locus ID:
nbisL1-mrna-13961
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 14191470 | 14195110 | + | nbisL1-mrna-13961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 49,143.60 Da | 48.53 | 82.44 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 97 | 375 | 4.26394E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 96 | 370 | 3.7E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 372 | 1.04E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 176 | 1.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 177 | 388 | 1.5E-62 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 91 | 376 | 39.990044 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 97 | 125 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 36 | - | - |
| Coils | Coil | Coil | 110 | 130 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39110.2 | - | 0 |
| RefSeq | XP_022765396.1 | - | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M5J7 | Putative receptor-like protein kinase At5g47070 isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology