Basic Information
Locus ID:
nbisL1-mrna-13890
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12605665 | 12610899 | - | nbisL1-mrna-13890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 91,278.81 Da | 42.15 | 79.85 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 113 | 308 | 5.04589E-98 | - |
| Pfam | PF00183 | Hsp90 protein | 291 | 780 | 1.0E-188 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 126 | 286 | 9.3E-12 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 364 | 622 | 2.28E-87 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 645 | 765 | 1.31E-31 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 104 | 318 | 1.04E-60 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 535 | 621 | 2.4E-33 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 622 | 769 | 3.7E-48 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 102 | 330 | 1.0E-86 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 362 | 534 | 4.1E-70 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 76 | 800 | 6.6E-239 | IPR001404 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | 7.0 | - |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 124 | 133 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 294 | 312 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 293 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 125 | 147 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 221 | 243 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 124 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 174 | 191 | 1.8E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 192 | 209 | 1.8E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 86 | 766 | 25.804918 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 807 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_021652594.1 | heat shock protein 90-6, mitochondrial [Hevea brasiliensis] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KL09 | Heat shock protein 83 isoform X2 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology