Basic Information
Locus ID:
nbisL1-mrna-13883
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001346F_pilon | 1207527 | 1209046 | + | nbisL1-mrna-13883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 50,575.33 Da | 47.66 | 75.97 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 70 | 124 | 2.26767E-7 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 70 | 132 | 9.1E-11 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 65 | 135 | 3.53E-12 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 67 | 176 | 3.0E-11 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 69 | 127 | 3.0E-4 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 70 | 135 | 11.5027 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 390 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021668274.1 | uncharacterized protein LOC110656047 isoform X1 [Hevea brasiliensis] | 0 |
| O13633 | Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9V4W8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology