Basic Information
Locus ID:
nbisL1-mrna-1388
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10787328 | 10794085 | + | nbisL1-mrna-1388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 148,016.84 Da | 47.09 | 74.44 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1062 | 1319 | 2.76562E-109 | - |
| CDD | cd06410 | PB1_UP2 | 222 | 318 | 5.99542E-47 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1058 | 1319 | 5.5E-64 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 235 | 317 | 1.8E-19 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 234 | 324 | 7.85E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1053 | 1318 | 2.46E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1049 | 1143 | 1.9E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 237 | 319 | 3.8E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1144 | 1344 | 4.2E-55 | - |
| SMART | SM00666 | PB1_new | 233 | 320 | 5.0E-29 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1056 | 1325 | 9.8E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1056 | 1326 | 41.078365 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1062 | 1087 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1181 | 1193 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1175 | 1193 | 5.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1246 | 1268 | 5.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1138 | 1151 | 5.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1290 | 1312 | 5.3E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 212 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021630743.2 | uncharacterized protein LOC110628407 [Manihot esculenta] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2IMV1 | Uncharacterized protein MANES_12G042400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology