Basic Information
Locus ID:
nbisL1-mrna-13869
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000061F_pilon | 1588923 | 1597258 | + | nbisL1-mrna-13869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 73,821.76 Da | 46.93 | 77.04 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 207 | 340 | 5.0E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 387 | 3.28E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 412 | 4.3E-65 | - |
| SMART | SM00220 | serkin_6 | 140 | 372 | 1.3E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 376 | 14.435775 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 146 | 177 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 223 | 235 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03940.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021620334.1 | casein kinase 1-like protein HD16 [Manihot esculenta] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MV07 | Casein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology