Basic Information
Locus ID:
nbisL1-mrna-13869
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 13398094 | 13408120 | - | nbisL1-mrna-13869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 199,725.27 Da | 45.59 | 74.57 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1504 | 1768 | 1.17309E-147 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 385 | 657 | 1.96495E-136 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1543 | 1710 | 1.5E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 405 | 647 | 1.8E-32 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 2.0E-17 | IPR000306 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 103 | 1.3E-19 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1478 | 1768 | 3.33E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 451 | 623 | 2.51E-43 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1475 | 1625 | 3.8E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1627 | 1769 | 6.1E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 450 | 623 | 7.9E-55 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 116 | 7.5E-22 | IPR013083 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 4.2E-21 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1477 | 1769 | 3.0E-125 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1442 | 1768 | 58.119869 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.594033 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1239 | 1290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1254 | 1272 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33240.2 | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021642012.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M4X8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology