Basic Information
Locus ID:
nbisL1-mrna-13856
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 5920799 | 5927396 | + | nbisL1-mrna-13856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 90,766.13 Da | 48.12 | 81.72 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 6.70525E-101 | - |
| Pfam | PF00183 | Hsp90 protein | 272 | 771 | 7.2E-193 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 268 | 3.7E-13 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 624 | 745 | 6.54E-34 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 4.45E-62 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 344 | 602 | 3.72E-89 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 315 | 3.2E-89 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 602 | 749 | 4.0E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 342 | 514 | 2.9E-73 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 515 | 601 | 7.8E-31 | - |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 2.4E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 60 | 788 | 2.7E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 9.2E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 9.2E-65 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 82 | 746 | 26.272503 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 326 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021591904.1 | heat shock protein 90-5, chloroplastic [Manihot esculenta] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KRL8 | Uncharacterized protein MANES_14G091600 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology