Basic Information
Locus ID:
nbisL1-mrna-13823
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Cysteine Histidine-rich C1 domain family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000061F_pilon | 1284275 | 1284781 | + | nbisL1-mrna-13823 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 7,893.48 Da | 50.93 | 62.57 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031396619.1 | uncharacterized protein LOC116207691 [Punica granatum] | 0 |
| TrEMBL | A0A2I0IZJ2 | Phorbol-ester/DAG-type domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_030441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 4 | AT2G21810.1, AT2G21830.1, AT2G21840.1, AT2G21850.1 |
| Brassicaceae | Eutrema salsugineum | 5 | Thhalv10000096m.g.v1.0, Thhalv10000100m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g01290.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB05g064140.2N, BniB05g064170.2N, BniB07g028200.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1160 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0001 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 3 | nbisL1-mrna-12109, nbisL1-mrna-5028, nbisL1-mrna-5029 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG17.926 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1892 |
| Rhizophoraceae | Carallia pectinifolia | 6 | nbisL1-mrna-3275, nbisL1-mrna-3288, nbisL1-mrna-3294 ... |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-13823, nbisL1-mrna-5376 |
| Salicaceae | Populus euphratica | 5 | populus_peu08735, populus_peu19514, populus_peu19515 ... |