Basic Information
Locus ID:
nbisL1-mrna-13801
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 12855452 | 12859204 | - | nbisL1-mrna-13801 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 69,904.25 Da | 48.92 | 79.62 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 155 | 5.4293E-42 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 512 | 5.5E-12 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 512 | 3.05E-23 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 151 | 1.0E-8 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 154 | 4.2E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 398 | 505 | 2.3E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 433 | 629 | 12.174335 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 593 | - | - |
| Coils | Coil | Coil | 359 | 405 | - | - |
| Coils | Coil | Coil | 299 | 319 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020536636.1 | U-box domain-containing protein 52 isoform X2 [Jatropha curcas] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1WWM1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G061600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology